Macromolecule Content

Total Structure Weight: 140.12 kDa
Atom Count: 8429
Residue Count: 1073
Unique protein chains: 1

3BJB

Crystal structure of a TetR transcriptional regulator from Rhodococcus sp. RHA1

DOI: 10.2210/pdb3BJB/pdb

Classification: TRANSCRIPTION REGULATOR
Organism(s): Rhodococcus jostii RHA1
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2007-12-03 Released: 2007-12-18
Deposition Author(s): Tan, K., Evdokimova, E., Kudritska, M., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.50 Å
R-Value Free: 0.278
R-Value Work: 0.232
R-Value Observed: 0.234

wwPDB Validation3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

The structure of a TetR transcriptional regulator from Rhodococcus sp. RHA1.

Tan, K., Evdokimova, E., Kudritska, M., Savchenko, A., Edwards, A.M., Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
Probable transcriptional regulator, TetR family protein	A, B, C, D, E, F	207	Rhodococcus jostii RHA1	Mutation(s): 0 Gene Names: RHA1_ro05814
Find proteins for Q0S4E5 (Rhodococcus jostii (strain RHA1)) Go to UniProtKB: Q0S4E5
Protein Feature View Full Protein Feature View for Q0S4E5

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
SO4 Query on SO4 Download CCD File	A, B, C, E, F	SULFATE ION O₄ S QAOWNCQODCNURD-UHFFFAOYSA-L		Ligand Interaction

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE Query on MSE	A,B,C,D,E,F	L-PEPTIDE LINKING	C₅ H₁₁ N O₂ Se		MET

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.50 Å
R-Value Free: 0.278
R-Value Work: 0.232
R-Value Observed: 0.234
Space Group: P 4₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 93.767	α = 90
b = 93.767	β = 90
c = 314.912	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
SBC-Collect	data collection
HKL-3000	data reduction
HKL-3000	data scaling
SHELXS	phasing
MLPHARE	phasing
DM	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2007-12-03
Released Date: 2007-12-18

Deposition Author(s):

Midwest Center for Structural Genomics (MCSG)

Revision History

Version 1.0: 2007-12-18
Type: Initial release
Version 1.1: 2011-07-13
Changes: Advisory, Source and taxonomy, Version format compliance

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.