3BGH

Crystal structure of putative neuraminyllactose-binding hemagglutinin homolog from Helicobacter pylori


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.278 
  • R-Value Work: 0.236 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal structure of putative neuraminyllactose-binding hemagglutinin homolog from Helicobacter pylori.

Bonanno, J.B.Dickey, J.Bain, K.T.McKenzie, C.Romero, R.Smith, D.Wasserman, S.Sauder, J.M.Burley, S.K.Almo, S.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Putative neuraminyllactose-binding hemagglutinin homolog
A, B
236Helicobacter pylori (strain ATCC 700392 / 26695)Mutation(s): 0 
Find proteins for O25166 (Helicobacter pylori (strain ATCC 700392 / 26695))
Go to UniProtKB:  O25166
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A, B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.278 
  • R-Value Work: 0.236 
  • Space Group: P 41 21 2
Unit Cell:
Length (Å)Angle (°)
a = 77.508α = 90.00
b = 77.508β = 90.00
c = 177.509γ = 90.00
Software Package:
Software NamePurpose
SCALAdata scaling
SHELXEmodel building
PDB_EXTRACTdata extraction
REFMACrefinement
MOSFLMdata reduction
MAR345data collection
SHELXCDphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2007-12-11
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Source and taxonomy, Version format compliance
  • Version 1.2: 2017-10-25
    Type: Refinement description
  • Version 1.3: 2018-11-14
    Type: Data collection, Structure summary