3A2E

Crystal structure of ginkbilobin-2, the novel antifungal protein from Ginkgo biloba seeds


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.38 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.207 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of ginkbilobin-2 with homology to the extracellular domain of plant cysteine-rich receptor-like kinases

Miyakawa, T.Miyazono, K.Sawano, Y.Hatano, K.Tanokura, M.

(2009) Proteins 77: 247-251


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ginkbilobin-2
A, B, C, D
108Ginkgo bilobaMutation(s): 0 
Gene Names: GNK2 (GNK2-1)
Find proteins for A4ZDL6 (Ginkgo biloba)
Go to UniProtKB:  A4ZDL6
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.38 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.207 
  • Space Group: P 21 3
Unit Cell:
Length (Å)Angle (°)
a = 143.169α = 90.00
b = 143.169β = 90.00
c = 143.169γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data scaling
SHELXSphasing
HKL-2000data collection
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-06-02
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance