3ZW5

Crystal structure of the human Glyoxalase domain-containing protein 5


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.199 
  • R-Value Work: 0.172 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structure of the Human Glyoxalase Domain-Containing Protein 5

Muniz, J.R.C.Kiyani, W.Vollmar, M.von Delft, F.Burgess-Brown, N.Arrowsmith, C.H.Edwards, A.M.Weigelt, J.Bountra, C.Yue, W.W.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
GLYOXALASE DOMAIN-CONTAINING PROTEIN 5
A, B
147Homo sapiensMutation(s): 0 
Gene Names: GLOD5
Find proteins for A6NK44 (Homo sapiens)
Go to Gene View: GLOD5
Go to UniProtKB:  A6NK44
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A, B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
EDO
Query on EDO

Download SDF File 
Download CCD File 
A, B
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
PEG
Query on PEG

Download SDF File 
Download CCD File 
A
DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.199 
  • R-Value Work: 0.172 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 51.490α = 90.00
b = 66.040β = 90.00
c = 76.870γ = 90.00
Software Package:
Software NamePurpose
SCALAdata scaling
BUSTERrefinement
MOSFLMdata reduction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-08-10
    Type: Initial release
  • Version 1.1: 2018-01-24
    Type: Database references