3ZI4

The structure of Beta-phosphoglucomutase Inhibited With Glucose-6-phosphate and Scandium Tetrafluoride


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.33 Å
  • R-Value Free: 0.174 
  • R-Value Work: 0.130 

wwPDB Validation 3D Report Full Report


This is version 2.0 of the entry. See complete history

Literature

Metal Fluorides: Multi-Functional Tools for the Study of Phosphoryl Transfer Enzymes

Bowler, M.W.Pellegrini, E.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
BETA-PHOSPHOGLUCOMUTASE
A
221Lactococcus lactis subsp. lactis (strain IL1403)Mutation(s): 0 
Gene Names: pgmB
EC: 5.4.2.6
Find proteins for P71447 (Lactococcus lactis subsp. lactis (strain IL1403))
Go to UniProtKB:  P71447
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
BG6
Query on BG6

Download SDF File 
Download CCD File 
A
BETA-D-GLUCOSE-6-PHOSPHATE
C6 H13 O9 P
NBSCHQHZLSJFNQ-VFUOTHLCSA-N
 Ligand Interaction
MG
Query on MG

Download SDF File 
Download CCD File 
A
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
SFL
Query on SFL

Download SDF File 
Download CCD File 
A
Scandium Tetrafluoride
F4 Sc
YVTFRTYUOUJWMQ-UHFFFAOYSA-J
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.33 Å
  • R-Value Free: 0.174 
  • R-Value Work: 0.130 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 37.152α = 90.00
b = 54.238β = 90.00
c = 104.550γ = 90.00
Software Package:
Software NamePurpose
MOSFLMdata reduction
MOLREPphasing
SCALAdata scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-01-15
    Type: Initial release
  • Version 1.1: 2014-12-10
    Type: Data collection
  • Version 2.0: 2018-02-14
    Type: Atomic model, Structure summary