3ZEH

Solution structure of the Hs. PSIP1 PWWP domain


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: LOWEST ENERGY 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Nucleosomal DNA Binding Drives the Recognition of H3K36-Methylated Nucleosomes by the Psip1-Pwwp Domain.

Van Nuland, R.Van Schaik, F.M.Simonis, M.Van Heesch, S.Cuppen, E.Boelens, R.Timmers, H.T.M.Van Ingen, H.

(2013) Epigenetics Chromatin 6: 12

  • DOI: 10.1186/1756-8935-6-12

  • PubMed Abstract: 
  • Recognition of histone modifications by specialized protein domains is a key step in the regulation of DNA-mediated processes like gene transcription. The structural basis of these interactions is usually studied using histone peptide models, neglect ...

    Recognition of histone modifications by specialized protein domains is a key step in the regulation of DNA-mediated processes like gene transcription. The structural basis of these interactions is usually studied using histone peptide models, neglecting the nucleosomal context. Here, we provide the structural and thermodynamic basis for the recognition of H3K36-methylated (H3K36me) nucleosomes by the PSIP1-PWWP domain, based on extensive mutational analysis, advanced nuclear magnetic resonance (NMR), and computational approaches.


    Organizational Affiliation

    NMR Spectroscopy Research Group, Bijvoet Center for Biomolecular Research, Utrecht University Utrecht, Padualaan 8, Utrecht, CH, 3854, The Netherlands. h.vaningen@uu.nl.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PC4 AND SFRS1-INTERACTING PROTEIN
A
105Homo sapiensGene Names: PSIP1 (DFS70, LEDGF, PSIP2)
Find proteins for O75475 (Homo sapiens)
Go to Gene View: PSIP1
Go to UniProtKB:  O75475
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: LOWEST ENERGY 
  • Olderado: 3ZEH Olderado

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-05-22
    Type: Initial release