3WP6

The complex structure of CDBFV E109A with xylotriose


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.43 Å
  • R-Value Free: 0.160 
  • R-Value Work: 0.128 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structural Analysis of a Glycoside Hydrolase Family 11 Xylanase from Neocallimastix patriciarum: Insights into the Molecular Basis of a Thermophilic Enzyme

Cheng, Y.S.Chen, C.C.Huang, C.H.Ko, T.P.Luo, W.Huang, J.W.Liu, J.R.Guo, R.T.

(2014) J.Biol.Chem. --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
CDBFV
A
228Neocallimastix patriciarumGene Names: xynC
EC: 3.2.1.8
Find proteins for Q9UV68 (Neocallimastix patriciarum)
Go to UniProtKB:  Q9UV68
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
BXP
Query on BXP

Download SDF File 
Download CCD File 
A
4-O-beta-D-xylopyranosyl-beta-D-xylopyranose
XYLOBIOSE
C10 H18 O9
LGQKSQQRKHFMLI-SJYYZXOBSA-N
 Ligand Interaction
XYP
Query on XYP

Download SDF File 
Download CCD File 
A
BETA-D-XYLOPYRANOSE
C5 H10 O5
SRBFZHDQGSBBOR-KKQCNMDGSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.43 Å
  • R-Value Free: 0.160 
  • R-Value Work: 0.128 
  • Space Group: P 64
Unit Cell:
Length (Å)Angle (°)
a = 93.219α = 90.00
b = 93.219β = 90.00
c = 43.364γ = 120.00
Software Package:
Software NamePurpose
PHASERphasing
HKL-2000data collection
HKL-2000data scaling
REFMACrefinement
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-03-19
    Type: Initial release