3WMT

Crystal structure of feruloyl esterase B from Aspergillus oryzae


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.168 
  • R-Value Work: 0.141 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of a feruloyl esterase belonging to the tannase family: a disulfide bond near a catalytic triad

Suzuki, K.Hori, A.Kawamoto, K.Thangudu, R.R.Ishida, T.Igarashi, K.Samejima, M.Wakagi, T.Koseki, T.Fushinobu, S.

(2014) Proteins --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Probable feruloyl esterase B-1
A, B
522Aspergillus oryzae (strain ATCC 42149 / RIB 40)Mutation(s): 0 
Gene Names: faeB-1
EC: 3.1.1.73
Find proteins for Q2UP89 (Aspergillus oryzae (strain ATCC 42149 / RIB 40))
Go to UniProtKB:  Q2UP89
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CA
Query on CA

Download SDF File 
Download CCD File 
A, B
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
NAG
Query on NAG

Download SDF File 
Download CCD File 
A, B
N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.168 
  • R-Value Work: 0.141 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 93.954α = 90.00
b = 142.937β = 90.00
c = 73.810γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data scaling
SOLVEphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-08-06
    Type: Initial release