3WJC

Crystal structure of mutant nitrobindin M75L/H76L/Q96C/M148L/H158L covalently linked with [Rh(Cp-Mal)(COD)] (NB4-Rh) from Arabidopsis thaliana


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.295 
  • R-Value Work: 0.239 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity

Fukumoto, K.Onoda, A.Mizohata, E.Bocola, M.Inoue, T.Schwaneberg, U.Hayashi, T.

(2014) CHEMCATCHEM --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
UPF0678 fatty acid-binding protein-like protein At1g79260
A, B
174Arabidopsis thalianaMutation(s): 5 
Find proteins for O64527 (Arabidopsis thaliana)
Go to UniProtKB:  O64527
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
RMD
Query on RMD

Download SDF File 
Download CCD File 
A, B
[(1,2,5,6-eta)-cyclooctane-1,2,5,6-tetrayl]{(1,2,3,4,5-eta)-1-[2-(2,5-dioxopyrrolidin-1-yl)ethyl]cyclopentadienyl}rhodium
C19 H24 N O2 Rh
SZAWNSHHLUVDRC-UHFFFAOYSA-N
 Ligand Interaction
BA
Query on BA

Download SDF File 
Download CCD File 
A, B
BARIUM ION
Ba
XDFCIPNJCBUZJN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.295 
  • R-Value Work: 0.239 
  • Space Group: P 41
Unit Cell:
Length (Å)Angle (°)
a = 67.888α = 90.00
b = 67.888β = 90.00
c = 129.895γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
REFMACrefinement
CrystalCleardata collection
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-04-09
    Type: Initial release