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Download EndnoteCrystal Structure of a Novel Site-Swapped Globin: Proximal and Distal Sites Constituted by Two Separate Subunits
Teh, A.H., Saito, J.A., Najimudin, N., Alam, M.To be published.
3WFW
Crystal Structure of the Closed Form of the HGbRL's Globin Domain
- DOI: 10.2210/pdb3WFW/pdb
- Classification: OXYGEN TRANSPORT
- Organism(s): Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))
- Expression System: Escherichia coli
- Deposited: 2013-07-24 Released: 2014-08-06
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.65 Å
- R-Value Free: 0.169
- R-Value Work: 0.151
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Hemoglobin-like flavoprotein fused to Roadblock/LC7 domain | A | 138 | Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4)) | Mutation(s): 0 Gene Names: hmp |
Find proteins for B3DUZ1 (Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))) Go to UniProtKB: B3DUZ1 | ||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| HEM Query on HEM | A | PROTOPORPHYRIN IX CONTAINING FE HEME C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L |  | Ligand Interaction | |
| MPD Query on MPD | A | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.65 Å
- R-Value Free: 0.169
- R-Value Work: 0.151
- Space Group: C 1 2 1
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 67.240 | α = 90.00 |
| b = 54.400 | β = 106.17 |
| c = 44.710 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| CrystalClear | data collection |
| MOLREP | phasing |
| XDS | data reduction |
| PHENIX | refinement |
| XDS | data scaling |
Entry History
Deposition Data
- Deposited Date: 2013-07-24
- Released Date: 2014-08-06
- Deposition Author(s): Teh, A.H.
Revision History
- Version 1.0: 2014-08-06
Type: Initial release
