3WE8

Pim-1 kinase in complex with Ruthenium-based inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.954 Å
  • R-Value Free: 0.177 
  • R-Value Work: 0.151 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Non-ATP-Mimetic Organometallic Protein Kinase Inhibitor

Wahler, K.Kraling, K.Steuber, H.Meggers, E.

(2013) ChemistryOpen 2: 180-185


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Serine/threonine-protein kinase pim-1
A
273Homo sapiensMutation(s): 1 
Gene Names: PIM1
EC: 2.7.11.1
Find proteins for P11309 (Homo sapiens)
Go to Gene View: PIM1
Go to UniProtKB:  P11309
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
RUI
Query on RUI

Download SDF File 
Download CCD File 
A
Cyclopentadienyl(carbon monoxide)(7-oxo-7,10-dihydro-1,8-phenanthrolin-10-yl-kappa~2~C~10~,N~1~)ruthenium
C18 H7 N2 O2 Ru
KWEXAKARNWEITR-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.954 Å
  • R-Value Free: 0.177 
  • R-Value Work: 0.151 
  • Space Group: P 65
Unit Cell:
Length (Å)Angle (°)
a = 97.730α = 90.00
b = 97.730β = 90.00
c = 81.190γ = 120.00
Software Package:
Software NamePurpose
PHENIXmodel building
PHENIXphasing
MAR345data collection
PHENIXrefinement
XDSdata scaling
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-05-21
    Type: Initial release
  • Version 1.1: 2017-11-22
    Type: Refinement description