3WAD

Crystal structure of glycosyltransferase VinC involved in the biosynthesis of vicenistatin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.202 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal Structure of Glycosyltransferase Vinc Involved in the Biosynthesis of Vicenistatin

Nango, E.Minami, A.Kumasaka, T.Eguchi, T.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Glycosyltransferase
A, B
419Streptomyces halstediiMutation(s): 0 
Gene Names: vinC
Find proteins for Q76KZ6 (Streptomyces halstedii)
Go to UniProtKB:  Q76KZ6
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MG
Query on MG

Download SDF File 
Download CCD File 
A
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.202 
  • Space Group: I 2 2 2
Unit Cell:
Length (Å)Angle (°)
a = 98.205α = 90.00
b = 130.392β = 90.00
c = 140.107γ = 90.00
Software Package:
Software NamePurpose
BSSdata collection
SOLVEphasing
HKL-2000data scaling
HKL-2000data reduction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-06-04
    Type: Initial release