3W6H

Crystal structure of 19F probe-labeled hCAI in complex with acetazolamide


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.964 Å
  • R-Value Free: 0.283 
  • R-Value Work: 0.222 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Quantitative Comparison of Protein Dynamics in Live Cells and In Vitro by In-Cell 19F-NMR

Takaoka, Y.Kioi, Y.Morito, A.Otani, J.Arita, K.Ashihara, E.Ariyoshi, M.Tochio, H.Shirakawa, M.Hamachi, I.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Carbonic anhydrase 1
A, B
260Homo sapiensMutation(s): 0 
Gene Names: CA1
EC: 4.2.1.1
Find proteins for P00915 (Homo sapiens)
Go to Gene View: CA1
Go to UniProtKB:  P00915
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A, B
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
FLB
Query on FLB

Download SDF File 
Download CCD File 
A, B
1-(2-ethoxyethoxy)-3,5-bis(trifluoromethyl)benzene
C12 H12 F6 O2
GWAJLKXPMOKZEL-UHFFFAOYSA-N
 Ligand Interaction
AZM
Query on AZM

Download SDF File 
Download CCD File 
A, B
5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE
C4 H6 N4 O3 S2
BZKPWHYZMXOIDC-UHFFFAOYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
AZMKi: 0.8 - 6300 nM (100) BINDINGDB
AZMKd: 290 - 1400 nM (100) BINDINGDB
AZMIC50: 1 - 6100 nM (100) BINDINGDB
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.964 Å
  • R-Value Free: 0.283 
  • R-Value Work: 0.222 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 62.039α = 90.00
b = 65.280β = 90.00
c = 120.485γ = 90.00
Software Package:
Software NamePurpose
ADSCdata collection
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-03-13
    Type: Initial release