Macromolecule Content

Total Structure Weight: 65.33 kDa
Atom Count: 3992
Residue Count: 470
Unique protein chains: 1

3W18

Structure of Aurora kinase A complexed to benzoimidazole-indazole inhibitor XIII

DOI: 10.2210/pdb3W18/pdb

Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2012-11-09 Released: 2014-02-05
Deposition Author(s): Oliveira, T.M., Kairies, N.A., Engh, R.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.50 Å
R-Value Free: 0.315
R-Value Work: 0.240
R-Value Observed: 0.244

wwPDB Validation 3D Report Full Report

Literature

Flexibility and multiple conformations of the activation and glycine rich loops of Aurora A accompanying inhibitor binding

Oliveira, T.M., Kairies, N.A., Engh, R.A.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Aurora kinase A	A, B	278	Homo sapiens	Mutation(s): 0 Gene Names: AURKA, AIK, AIRK1, ARK1, AURA, AYK1, BTAK, IAK1, STK15, STK6 EC: 2.7.11.1
Find proteins for O14965 (Homo sapiens) Explore O14965 Go to UniProtKB: O14965
NIH Common Fund Data Resources
PHAROS O14965 GTEx ENSG00000087586
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
N13 Query on N13 Download Ideal Coordinates CCD File SDF format, chain C [A] SDF format, chain D [B] MOL2 format, chain C [A] MOL2 format, chain D [B]	A, B	2-{3-[3-(1H-benzimidazol-2-yl)-1H-indazol-6-yl]-1H-pyrazol-5-yl}-N-(3-fluorophenyl)acetamide C₂₅ H₁₈ F N₇ O XLSVGNQXTNEETK-UHFFFAOYSA-N		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.50 Å
R-Value Free: 0.315
R-Value Work: 0.240
R-Value Observed: 0.244
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 75.94	α = 90
b = 85.86	β = 90
c = 85.29	γ = 90

Software Package:

Software Name	Purpose
HKL-3000	data collection
AMoRE	phasing
REFMAC	refinement
MOSFLM	data reduction
SCALA	data scaling

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2012-11-09
Released Date: 2014-02-05

Deposition Author(s):

Revision History

Version 1.0: 2014-02-05
Type: Initial release

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.