Macromolecule Content

Total Structure Weight: 65332.72
Atom Count: 3911
Residue Count: 556
Unique protein chains: 1

3W18

Structure of Aurora kinase A complexed to benzoimidazole-indazole inhibitor XIII

DOI: 10.2210/pdb3W18/pdb

Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Organism(s): Homo sapiens
Expression System: Escherichia coli

Deposited: 2012-11-09 Released: 2014-02-05
Deposition Author(s): Oliveira, T.M., Kairies, N.A., Engh, R.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å
R-Value Free: 0.315
R-Value Work: 0.240

wwPDB Validation3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Flexibility and multiple conformations of the activation and glycine rich loops of Aurora A accompanying inhibitor binding

Oliveira, T.M., Kairies, N.A., Engh, R.A.

To be published.

Macromolecules

Find similar proteins by: Sequence | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
Aurora kinase A	A, B	278	Homo sapiens	Mutation(s): 0 Gene Names: AURKA (AIK, AIRK1, ARK1, AURA, AYK1, BTAK, IAK1, STK15, STK6) EC: 2.7.11.1
Find proteins for O14965 (Homo sapiens) Go to Gene View: AURKA Go to UniProtKB: O14965
Protein Feature View Full Protein Feature View for O14965

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram & Interactions	3D Interactions
N13 Query on N13 Download SDF File Download CCD File	A, B	2-{3-[3-(1H-benzimidazol-2-yl)-1H-indazol-6-yl]-1H-pyrazol-5-yl}-N-(3-fluorophenyl)acetamide C₂₅ H₁₈ F N₇ O XLSVGNQXTNEETK-UHFFFAOYSA-N		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å
R-Value Free: 0.315
R-Value Work: 0.240
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length (Å)	Angle (°)
a = 75.940	α = 90.00
b = 85.860	β = 90.00
c = 85.290	γ = 90.00

Software Package:

Software Name	Purpose
REFMAC	refinement
HKL-3000	data collection
AMoRE	phasing
MOSFLM	data reduction
SCALA	data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots

Entry History

Deposition Data

Deposited Date: 2012-11-09
Released Date: 2014-02-05
Deposition Author(s): Oliveira, T.M., Kairies, N.A., Engh, R.A.

Revision History

Version 1.0: 2014-02-05
Type: Initial release

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the National Institutes of Health, and the US Department of Energy (DE-SC0019749).