3VXC

Crystal Structure of Xylobiose-BxlE complex from Streptomyces thermoviolaceus OPC-520


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.213 
  • R-Value Work: 0.168 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal Structure of Xylooligosaccharide-Binding Protein from Streptomyces thermoviolaceus OPC-520: Dramatic Conformational Change with Ligand binding

Tomoo, K.Ishida, T.Miyamoto, K.Tsujibo, H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Putative sugar-binding lipoprotein
A, B
436Streptomyces thermoviolaceusGene Names: bxlD
Find proteins for Q76BU9 (Streptomyces thermoviolaceus)
Go to UniProtKB:  Q76BU9
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
BXP
Query on BXP

Download SDF File 
Download CCD File 
A, B
4-O-beta-D-xylopyranosyl-beta-D-xylopyranose
XYLOBIOSE
C10 H18 O9
LGQKSQQRKHFMLI-SJYYZXOBSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.213 
  • R-Value Work: 0.168 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 103.672α = 90.00
b = 163.157β = 90.00
c = 42.931γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-09-18
    Type: Initial release