Download Mendeley
Download EndnoteCrystal Structure of Xylooligosaccharide-Binding Protein from Streptomyces thermoviolaceus OPC-520: Dramatic Conformational Change with Ligand binding
Tomoo, K., Ishida, T., Miyamoto, K., Tsujibo, H.To be published.
3VXC
Crystal Structure of Xylobiose-BxlE complex from Streptomyces thermoviolaceus OPC-520
- DOI: 10.2210/pdb3VXC/pdb
- Classification: SUGAR BINDING PROTEIN
- Organism(s): Streptomyces thermoviolaceus
- Expression System: Escherichia coli
- Deposited: 2012-09-11 Released: 2013-09-18
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.85 Å
- R-Value Free: 0.213
- R-Value Work: 0.168
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Putative sugar-binding lipoprotein | A, B | 436 | Streptomyces thermoviolaceus | Mutation(s): 0 Gene Names: bxlD |
Find proteins for Q76BU9 (Streptomyces thermoviolaceus) Go to UniProtKB: Q76BU9 | ||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| BXP Query on BXP | A, B | 4-O-beta-D-xylopyranosyl-beta-D-xylopyranose XYLOBIOSE C10 H18 O9 LGQKSQQRKHFMLI-SJYYZXOBSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.85 Å
- R-Value Free: 0.213
- R-Value Work: 0.168
- Space Group: P 21 21 2
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 103.672 | α = 90.00 |
| b = 163.157 | β = 90.00 |
| c = 42.931 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
Entry History
Deposition Data
- Deposited Date: 2012-09-11
- Released Date: 2013-09-18
- Deposition Author(s): Tomoo, K., Ishida, T., Miyamoto, K., Tsujibo, H.
Revision History
- Version 1.0: 2013-09-18
Type: Initial release
