3VX8

Crystal structure of Arabidopsis thaliana Atg7NTD-Atg3 complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.11 Å
  • R-Value Free: 0.278 
  • R-Value Work: 0.226 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Non-canonical recognition and ambiguous Ubl-loading of two distinct E2s by autophagy-essential E1, Atg7

Yamaguchi, M.Matoba, K.Sawada, R.Fujioka, Y.Nakatogawa, H.Yamamoto, H.Kobashigawa, Y.Hoshida, H.Akada, R.Ohsumi, Y.Noda, N.N.Inagaki, F.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ubiquitin-like modifier-activating enzyme atg7
D, A
323Arabidopsis thalianaGene Names: ATG7 (APG7, PEUP4)
Find proteins for Q94CD5 (Arabidopsis thaliana)
Go to Gene View: ATG7
Go to UniProtKB:  Q94CD5
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Autophagy-related protein 3
B, C
292Arabidopsis thalianaGene Names: ATG3 (APG3)
Find proteins for Q0WWQ1 (Arabidopsis thaliana)
Go to Gene View: ATG3
Go to UniProtKB:  Q0WWQ1
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.11 Å
  • R-Value Free: 0.278 
  • R-Value Work: 0.226 
  • Space Group: P 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 101.520α = 90.00
b = 132.683β = 90.00
c = 102.805γ = 90.00
Software Package:
Software NamePurpose
SOLVEphasing
RESOLVEphasing
DENZOdata reduction
REFMACrefinement
PDB_EXTRACTdata extraction
SCALEPACKdata scaling
HKL-2000data collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2012-11-14
    Type: Initial release