3VSN

The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.194 
  • R-Value Work: 0.166 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein

Kawaguchi, Y.Sugiura, N.Kimata, K.Kimura, M.Kakuta, Y.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Occlusion-derived virus envelope protein E66
A
659Autographa californica nuclear polyhedrosis virusGene Names: P79
Find proteins for Q00704 (Autographa californica nuclear polyhedrosis virus)
Go to UniProtKB:  Q00704
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
IOD
Query on IOD

Download SDF File 
Download CCD File 
A
IODIDE ION
I
XMBWDFGMSWQBCA-UHFFFAOYSA-M
 Ligand Interaction
GOL
Query on GOL

Download SDF File 
Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.194 
  • R-Value Work: 0.166 
  • Space Group: P 62
Unit Cell:
Length (Å)Angle (°)
a = 118.172α = 90.00
b = 118.172β = 90.00
c = 100.099γ = 120.00
Software Package:
Software NamePurpose
HKL-2000data reduction
HKL-2000data scaling
ADSCdata collection
SHELXSphasing
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-05-22
    Type: Initial release