3VOQ

Crystal structure of the pleckstrin homology domain of human Sin1, a TORC2 subunit


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.224 
  • R-Value Work: 0.193 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structures of the pleckstrin homology domain of Saccharomyces cerevisiae Avo1 and its human orthologue Sin1, an essential subunit of TOR complex 2

Pan, D.Matsuura, Y.

(2012) Acta Crystallogr.,Sect.F 68: 386-392

  • DOI: 10.1107/S1744309112007178
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • In eukaryotes, multiprotein complexes termed TOR complex 1 (TORC1) and TOR complex 2 (TORC2) function as major regulators of cell growth, metabolism and ageing. The C-terminal domain of the Saccharomyces cerevisiae TORC2 component Avo1 is required fo ...

    In eukaryotes, multiprotein complexes termed TOR complex 1 (TORC1) and TOR complex 2 (TORC2) function as major regulators of cell growth, metabolism and ageing. The C-terminal domain of the Saccharomyces cerevisiae TORC2 component Avo1 is required for plasma-membrane localization of TORC2 and is essential for yeast viability. X-ray crystal structures of the C-terminal domain of Avo1 and of its human orthologue Sin1 have been determined. The structures show that the C-termini of Avo1 and Sin1 both have the pleckstrin homology (PH) domain fold. Comparison with known PH-domain structures suggests a putative binding site for phosphoinositides.


    Organizational Affiliation

    Division of Biological Science, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Target of rapamycin complex 2 subunit MAPKAP1
A, B
125Homo sapiensMutation(s): 0 
Gene Names: MAPKAP1 (MIP1, SIN1)
Find proteins for Q9BPZ7 (Homo sapiens)
Go to Gene View: MAPKAP1
Go to UniProtKB:  Q9BPZ7
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.224 
  • R-Value Work: 0.193 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 79.293α = 90.00
b = 79.293β = 90.00
c = 123.599γ = 90.00
Software Package:
Software NamePurpose
BSSdata collection
MOSFLMdata reduction
PDB_EXTRACTdata extraction
MOLREPphasing
REFMACrefinement
SCALAdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2012-01-31 
  • Released Date: 2012-04-11 
  • Deposition Author(s): Pan, D., Matsuura, Y.

Revision History 

  • Version 1.0: 2012-04-11
    Type: Initial release
  • Version 1.1: 2013-08-14
    Type: Database references