3V7O

Crystal structure of the C-terminal domain of Ebola virus VP30 (strain Reston-89)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.193 
  • R-Value Observed: 0.195 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structure of the Reston ebolavirus VP30 C-terminal domain.

Clifton, M.C.Kirchdoerfer, R.N.Atkins, K.Abendroth, J.Raymond, A.Grice, R.Barnes, S.Moen, S.Lorimer, D.Edwards, T.E.Myler, P.J.Saphire, E.O.

(2014) Acta Crystallogr Sect F Struct Biol Cryst Commun 70: 457-460

  • DOI: 10.1107/S2053230X14003811
  • Primary Citation of Related Structures:  
    3V7O

  • PubMed Abstract: 
  • The ebolaviruses can cause severe hemorrhagic fever. Essential to the ebolavirus life cycle is the protein VP30, which serves as a transcriptional cofactor. Here, the crystal structure of the C-terminal, NP-binding domain of VP30 from Reston ebolavirus is presented ...

    The ebolaviruses can cause severe hemorrhagic fever. Essential to the ebolavirus life cycle is the protein VP30, which serves as a transcriptional cofactor. Here, the crystal structure of the C-terminal, NP-binding domain of VP30 from Reston ebolavirus is presented. Reston VP30 and Ebola VP30 both form homodimers, but the dimeric interfaces are rotated relative to each other, suggesting subtle inherent differences or flexibility in the dimeric interface.


    Organizational Affiliation

    Department of Immunology and Microbial Science, The Scripps Research Institute, 10550 North Torrey Pines Road, IMM-21, La Jolla, CA 92037, USA.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Minor nucleoprotein VP30 AB227Reston ebolavirus - Reston (1989)Mutation(s): 0 
Gene Names: VP30
Find proteins for Q8JPX6 (Reston ebolavirus (strain Reston-89))
Explore Q8JPX6 
Go to UniProtKB:  Q8JPX6
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download Ideal Coordinates CCD File 
A, B
1,2-ETHANEDIOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 49.31α = 90
b = 93.74β = 90
c = 111.22γ = 90
Software Package:
Software NamePurpose
XSCALEdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction
XDSdata reduction

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2012-02-08
    Type: Initial release
  • Version 1.1: 2014-05-14
    Changes: Database references