3V2Z

Nitrite Bound Chlorin Substituted Myoglobin- Method 2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.184 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Distal pocket control of nitrite binding in myoglobin

Yi, J.Thomas, L.M.Richter-Addo, G.B.

(2012) Angew.Chem.Int.Ed.Engl. 51: 3625-3627


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Myoglobin
A
153Equus caballusMutation(s): 0 
Gene Names: MB
Find proteins for P68082 (Equus caballus)
Go to Gene View: MB
Go to UniProtKB:  P68082
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
HKL
Query on HKL

Download SDF File 
Download CCD File 
A
Fe(III) pyropheophorbide-a methyl ester
C34 H34 Fe N4 O3
IHBXBEKUKOKKKZ-YXVFZXCADA
 Ligand Interaction
NO2
Query on NO2

Download SDF File 
Download CCD File 
A
NITRITE ION
N O2
IOVCWXUNBOPUCH-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.184 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 34.285α = 90.00
b = 30.360β = 104.94
c = 64.060γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
d*TREKdata reduction
REFMACrefinement
d*TREKdata scaling
CrystalCleardata collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2012-11-21
    Type: Initial release