3USF

Crystal structure of DAVA-4


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.463 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.178 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of DAVA-4

Stetefeld, J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Glutamate-1-semialdehyde 2,1-aminomutase
A, B
427Synechococcus elongatus (strain PCC 7942)Gene Names: hemL
EC: 5.4.3.8
Find proteins for Q31QJ2 (Synechococcus elongatus (strain PCC 7942))
Go to UniProtKB:  Q31QJ2
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
HOZ
Query on HOZ

Download SDF File 
Download CCD File 
A
(4S)-4,5-DIAMINOPENTANOIC ACID
C5 H12 N2 O2
PQGAAJQIFBEYSA-BYPYZUCNSA-N
 Ligand Interaction
PLR
Query on PLR

Download SDF File 
Download CCD File 
A, B
(5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
4'-DEOXYPYRIDOXINE PHOSPHATE
C8 H12 N O5 P
RBCOYOYDYNXAFA-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.463 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.178 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 68.582α = 90.00
b = 108.781β = 90.00
c = 124.712γ = 90.00
Software Package:
Software NamePurpose
CrystalCleardata collection
HKL-2000data reduction
CNSrefinement
AMoREphasing
SCALEPACKdata scaling
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2011-11-23 
  • Released Date: 2012-12-05 
  • Deposition Author(s): Stetefeld, J.

Revision History 

  • Version 1.0: 2012-12-05
    Type: Initial release