3USF

Crystal structure of DAVA-4


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.46 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.178 

wwPDB Validation 3D Report Full Report



Literature

Crystal structure of DAVA-4

Stetefeld, J.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Glutamate-1-semialdehyde 2,1-aminomutaseA, B427Synechococcus elongatus PCC 7942 = FACHB-805Mutation(s): 0 
Gene Names: hemLSynpcc7942_0645
EC: 5.4.3.8
Find proteins for Q31QJ2 (Synechococcus elongatus (strain PCC 7942 / FACHB-805))
Explore Q31QJ2 
Go to UniProtKB:  Q31QJ2
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PLR
Query on PLR

Download CCD File 
A, B
(5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE
C8 H12 N O5 P
RBCOYOYDYNXAFA-UHFFFAOYSA-N
 Ligand Interaction
HOZ
Query on HOZ

Download CCD File 
A
(4S)-4,5-DIAMINOPENTANOIC ACID
C5 H12 N2 O2
PQGAAJQIFBEYSA-BYPYZUCNSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.46 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.178 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 68.582α = 90
b = 108.781β = 90
c = 124.712γ = 90
Software Package:
Software NamePurpose
CNSrefinement
PDB_EXTRACTdata extraction
CrystalCleardata collection
HKL-2000data reduction
SCALEPACKdata scaling
AMoREphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

  • Deposited Date: 2011-11-23 
  • Released Date: 2012-12-05 
  • Deposition Author(s): Stetefeld, J.

Revision History 

  • Version 1.0: 2012-12-05
    Type: Initial release