3UI6

0.89 A resolution crystal structure of human Parvulin 14 in complex with oxidized DTT


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.89 Å
  • R-Value Free: 0.116 
  • R-Value Work: 0.103 
  • R-Value Observed: 0.103 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

0.89 A resolution crystal structure of human Parvulin 14 in complex with oxidized DTT

Mueller, J.W.Link, N.M.Matena, A.Hoppstock, L.Rueppel, A.Bayer, P.Blankenfeldt, W.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4A101Homo sapiensMutation(s): 0 
Gene Names: PIN4Q9Y237
EC: 5.2.1.8
Find proteins for Q9Y237 (Homo sapiens)
Explore Q9Y237 
Go to UniProtKB:  Q9Y237
NIH Common Fund Data Resources
PHAROS  Q9Y237
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
D1D
Query on D1D

Download CCD File 
A
(4S,5S)-1,2-DITHIANE-4,5-DIOL
C4 H8 O2 S2
YPGMOWHXEQDBBV-QWWZWVQMSA-N
 Ligand Interaction
SO4
Query on SO4

Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
NA
Query on NA

Download CCD File 
A
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.89 Å
  • R-Value Free: 0.116 
  • R-Value Work: 0.103 
  • R-Value Observed: 0.103 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 34.24α = 90
b = 47.02β = 90
c = 51.85γ = 90
Software Package:
Software NamePurpose
XSCALEdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2012-11-07
    Type: Initial release
  • Version 1.1: 2012-12-05
    Changes: Structure summary
  • Version 1.2: 2018-01-31
    Changes: Database references