3UDO

Crystal structure of putative isopropylamlate dehydrogenase from Campylobacter jejuni


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.176 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of putative isopropylamlate dehydrogenase from Campylobacter jejuni

Tkaczuk, K.L.Chruszcz, M.Blus, B.J.Onopriyenko, O.Grimshaw, S.Savchenko, A.Anderson, W.F.Minor, W.Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
3-isopropylmalate dehydrogenase
A
361Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)Gene Names: leuB
EC: 1.1.1.85
Find proteins for Q9PLW0 (Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168))
Go to UniProtKB:  Q9PLW0
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
EDO
Query on EDO

Download SDF File 
Download CCD File 
A
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 74.794α = 90.00
b = 74.794β = 90.00
c = 163.787γ = 90.00
Software Package:
Software NamePurpose
SHELXEmodel building
ARP/wARPmodel building
CCP4model building
CCP4phasing
HKL-3000data reduction
DMmodel building
HKL-3000data collection
REFMACrefinement
HKL-3000data scaling
MLPHAREphasing
HKL-3000phasing
SHELXDphasing
Cootmodel building
DMphasing
RESOLVEphasing
RESOLVEmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-11-09
    Type: Initial release
  • Version 1.1: 2017-11-08
    Type: Refinement description