3UBL

Crystal structure of glutathione transferase (TARGET EFI-501770) from leptospira interrogans with gsh bound


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.200 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal Structure of Glutathione S-Transferase from Leptospira Interrogans

Patskovsky, Y.Toro, R.Bhosle, R.Zencheck, W.D.Hillerich, B.Seidel, R.D.Washington, E.Scott Glenn, A.Chowdhury, S.Evans, B.Hammonds, J.Imker, H.J.Armstrong, R.N.Gerlt, J.A.Almo, S.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Glutathione transferase
A, B
242Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601)Mutation(s): 0 
Gene Names: gst
Find proteins for Q8F2Y8 (Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601))
Go to UniProtKB:  Q8F2Y8
Small Molecules
Ligands 5 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

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Download CCD File 
A, B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
CL
Query on CL

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Download CCD File 
A, B
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
GOL
Query on GOL

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A, B
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
GSH
Query on GSH

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Download CCD File 
A, B
GLUTATHIONE
C10 H17 N3 O6 S
RWSXRVCMGQZWBV-WDSKDSINSA-N
 Ligand Interaction
UNX
Query on UNX

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Download CCD File 
A, B
UNKNOWN ATOM OR ION
X
*
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.200 
  • Space Group: P 43 2 2
Unit Cell:
Length (Å)Angle (°)
a = 82.591α = 90.00
b = 82.591β = 90.00
c = 175.701γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data scaling
HKL-2000data reduction
PHASERphasing
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2011-11-09
    Type: Initial release
  • Version 1.1: 2011-12-21
    Type: Non-polymer description
  • Version 1.2: 2012-02-29
    Type: Database references, Structure summary
  • Version 1.3: 2018-01-24
    Type: Structure summary