3U9J

Crystal structure of oxidized human FBXL5 hemerythrin like domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.603 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.167 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

The Structural Basis of Iron Sensing by the Human F-box Protein FBXL5.

Shu, C.Sung, M.W.Stewart, M.D.Igumenova, T.I.Tan, X.Li, P.

(2012) Chembiochem 13: 788-791


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
F-box/LRR-repeat protein 5
A, B
160Homo sapiensMutation(s): 0 
Gene Names: FBXL5 (FBL4, FBL5, FLR1)
Find proteins for Q9UKA1 (Homo sapiens)
Go to Gene View: FBXL5
Go to UniProtKB:  Q9UKA1
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FE
Query on FE

Download SDF File 
Download CCD File 
A, B
FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.603 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.167 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 55.082α = 90.00
b = 77.343β = 90.00
c = 78.190γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data collection
PHENIXmodel building
HKL-2000data scaling
PHENIXphasing
HKL-2000data reduction
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2011-10-19 
  • Released Date: 2012-02-22 
  • Deposition Author(s): Li, P.

Revision History 

  • Version 1.0: 2012-02-22
    Type: Initial release
  • Version 1.1: 2012-04-25
    Type: Database references