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Download EndnoteStructure-Activity Relationship of BasE
Neres, J., Drake, E., Gulick, A.M., Aldrich, C.C.To be published.
3U17
Structure of BasE N-terminal domain from Acinetobacter baumannii bound to 6-(p-benzoyl)phenyl-1-(pyridin-4-ylmethyl)-1H-pyrazolo[3,4-b]pyridine-4-carboxylic acid
- DOI: 10.2210/pdb3U17/pdb
- Classification: LIGASE
- Expression System: Escherichia coli BL21(DE3)
- Deposited: 2011-09-29 Released: 2012-10-03
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.1 Å
- R-Value Free: 0.221
- R-Value Work: 0.189
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| H90 Query on H90 | A, B | 6-(4-benzoylphenyl)-1-(pyridin-4-ylmethyl)-1H-pyrazolo[3,4-b]pyridine-4-carboxylic acid C26 H18 N4 O3 PTCVSDDJAQNAKH-UHFFFAOYSA-N |  | Ligand Interaction | |
| CA Query on CA | A, B | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | Ligand Interaction | |
| MRD Query on MRD | B | (4R)-2-METHYLPENTANE-2,4-DIOL C6 H14 O2 SVTBMSDMJJWYQN-RXMQYKEDSA-N |  | Ligand Interaction | |
| MPD Query on MPD | A | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.1 Å
- R-Value Free: 0.221
- R-Value Work: 0.189
- Space Group: P 21 21 21
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 65.368 | α = 90.00 |
| b = 144.232 | β = 90.00 |
| c = 148.735 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| Blu-Ice | data collection |
| HKL-2000 | data scaling |
| PHENIX | refinement |
| HKL-2000 | data reduction |
| REFMAC | phasing |
Entry History
Deposition Data
- Deposited Date: 2011-09-29
- Released Date: 2012-10-03
- Deposition Author(s): Gulick, A.M., Drake, E.J., Aldrich, C.C., Neres, J.
