3TY6 | pdb_00003ty6

ATP-dependent Protease HslV from Bacillus anthracis str. Ames

• PDB DOI: https://doi.org/10.2210/pdb3TY6/pdb

• Classification: HYDROLASE
• Organism(s): Bacillus anthracis str. Ames
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2011-09-23 Released: 2011-10-05 
• Deposition Author(s): Kim, Y., Mulligan, R., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.50 Å
• R-Value Free: 
  0.204 (Depositor), 0.201 (DCC) 
• R-Value Work: 
  0.165 (Depositor), 0.168 (DCC) 
• R-Value Observed: 
  0.166 (Depositor) 

Starting Model: experimental

Literature

ATP-dependent Protease HslV from Bacillus anthracis str. Ames

Kim, Y., Mulligan, R., Kwon, K., Anderson, W.F., Joachimiak, A.

To be published.

Biological Assembly 1  

Global Symmetry: Dihedral - D6  (Explore in 3D)
Global Stoichiometry: Homo 12-mer - A12 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 119.04 kDa 
• Atom Count: 8,154 
• Modeled Residue Count: 1,066 
• Deposited Residue Count: 1,098 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
ATP-dependent protease subunit HslV	A, B, C, D, E, F	183	Bacillus anthracis str. Ames	Mutation(s): 0  Gene Names: BAS3681, BA_3968, GBAA_3968, hslV EC: 3.4.25.2
UniProt
Find proteins for Q81WK5 (Bacillus anthracis) Explore Q81WK5  Go to UniProtKB:  Q81WK5

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
SO4	G [auth A], H [auth B], I [auth C], J [auth E], K [auth E], L [auth F]	SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.50 Å
• R-Value Free:  0.204 (Depositor), 0.201 (DCC) 
• R-Value Work:  0.165 (Depositor), 0.168 (DCC) 
• R-Value Observed: 0.166 (Depositor) 

Diffraction Data: https://doi.org/10.18430/m33ty6

Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 140.255	α = 90
b = 127.543	β = 130.03
c = 90.1	γ = 90

Software Package:

Software Name	Purpose
SBC-Collect	data collection
HKL-3000	data collection
HKL-3000	phasing
PHENIX	model building
PHENIX	refinement
HKL-3000	data reduction
HKL-3000	data scaling
PHENIX	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2011-10-05 
Deposition Author(s): Kim, Y., Mulligan, R., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History  

• Version 1.0: 2011-10-05
  Type: Initial release
  
• Version 1.1: 2018-01-24
  Changes: Advisory, Database references
• Version 1.2: 2023-09-13
  Changes: Advisory, Data collection, Database references, Derived calculations, Refinement description