3TMH

Crystal structure of dual-specific A-kinase anchoring protein 2 in complex with cAMP-dependent protein kinase A type II alpha and PDZK1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.8 Å
  • R-Value Free: 0.328 
  • R-Value Work: 0.268 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Differential mode of D-AKAP2 to PKA isoforms: Insights from D-AKAP2 PKA RII PDZK1 ternary complex structure

Sarma, G.N.Phan, R.H.Sankaran, B.Taylor, S.S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Na(+)/H(+) exchange regulatory cofactor NHE-RF3
A, E, I
87Homo sapiensMutation(s): 0 
Gene Names: PDZK1 (CAP70, NHERF3, PDZD1)
Find proteins for Q5T2W1 (Homo sapiens)
Go to Gene View: PDZK1
Go to UniProtKB:  Q5T2W1
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
cAMP-dependent protein kinase type II-alpha regulatory subunit
B, C, F, G
48Rattus norvegicusMutation(s): 0 
Gene Names: Prkar2a
Find proteins for P12368 (Rattus norvegicus)
Go to UniProtKB:  P12368
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
A-kinase anchor protein 10, mitochondrial
D, H, L
45Homo sapiensMutation(s): 0 
Gene Names: AKAP10
Find proteins for O43572 (Homo sapiens)
Go to Gene View: AKAP10
Go to UniProtKB:  O43572
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.8 Å
  • R-Value Free: 0.328 
  • R-Value Work: 0.268 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 121.472α = 90.00
b = 121.472β = 90.00
c = 88.282γ = 120.00
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data collection
HKL-2000data scaling
HKL-2000data reduction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2012-09-05
    Type: Initial release