The structure of an unconventional HD-GYP protein from Bdellovibrio reveals the roles of conserved residues in this class of cyclic-di-GMP phosphodiesterases.

Macromolecule Content

3TM8

Classification: HYDROLASE SIGNALING PROTEIN
Organism(s): Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Expression System: Escherichia coli BL21

Experimental Data Snapshot

wwPDB Validation3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

(2011) MBio 2: --

Macromolecules

Find similar proteins by: Sequence | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
Uncharacterized protein	A, B	328	Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)	Mutation(s): 0
Find proteins for Q6MM30 (Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)) Go to UniProtKB: Q6MM30
Protein Feature View Full Protein Feature View for Q6MM30

Small Molecules

Ligands 4 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram & Interactions	3D Interactions
PO4 Query on PO4 Download SDF File Download CCD File	A, B	PHOSPHATE ION O₄ P NBIIXXVUZAFLBC-UHFFFAOYSA-K		Ligand Interaction
EDO Query on EDO Download SDF File Download CCD File	B	1,2-ETHANEDIOL ETHYLENE GLYCOL C₂ H₆ O₂ LYCAIKOWRPUZTN-UHFFFAOYSA-N		Ligand Interaction
FE Query on FE Download SDF File Download CCD File	A, B	FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N		Ligand Interaction
DMS Query on DMS Download SDF File Download CCD File	A, B	DIMETHYL SULFOXIDE C₂ H₆ O S IAZDPXIOMUYVGZ-UHFFFAOYSA-N		Ligand Interaction