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Download EndnoteUgi Multicomponent Reaction Derived p53-Mdm2 Antagonists
Wolf, S., Huang, Y., Popowicz, G.M., Goda, S., Holak, T.A., Doemling, A.To be published.
3TJ2
Structure of a novel submicromolar MDM2 inhibitor
- DOI: 10.2210/pdb3TJ2/pdb
- Classification: PROTEIN BINDING/INHIBITOR
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Deposited: 2011-08-23 Released: 2012-09-12
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.1 Å
- R-Value Free: 0.308
- R-Value Work: 0.223
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| K Query on K | A | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N |  | Ligand Interaction | |
| TJ2 Query on TJ2 | A, C | 3-{(1S)-2-(tert-butylamino)-1-[(4-chlorobenzyl)(formyl)amino]-2-oxoethyl}-6-chloro-1H-indole-2-carboxylic acid C23 H23 Cl2 N3 O4 ZAOJHZGIRKVCBH-FQEVSTJZSA-N |  | Ligand Interaction | |
| External Ligand Annotations | |
|---|---|
| ID | Binding Affinity (Sequence Identity %) |
| TJ2 | Ki: 300 - 700 nM (100) BINDINGDB |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.1 Å
- R-Value Free: 0.308
- R-Value Work: 0.223
- Space Group: P 1 21 1
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 32.440 | α = 90.00 |
| b = 58.880 | β = 99.21 |
| c = 49.510 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| XSCALE | data scaling |
| REFMAC | refinement |
| MAR345 | data collection |
| MOLREP | phasing |
| XDS | data reduction |
Entry History
Deposition Data
- Deposited Date: 2011-08-23
- Released Date: 2012-09-12
- Deposition Author(s): Wolf, S., Huang, Y., Popowicz, G.M., Goda, S., Holak, T.A., Doemling, A.
Revision History
- Version 1.0: 2012-09-12
Type: Initial release - Version 1.1: 2017-11-08
Type: Database references, Refinement description
