3TGF | pdb_00003tgf

THE SOLUTION STRUCTURE OF HUMAN TRANSFORMING GROWTH FACTOR ALPHA


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Submitted: 

wwPDB Validation 3D Report Full Report

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This is version 1.4 of the entry. See complete history

Literature

The solution structure of human transforming growth factor alpha.

Harvey, T.S.Wilkinson, A.J.Tappin, M.J.Cooke, R.M.Campbell, I.D.

(1991) Eur J Biochem 198: 555-562

  • DOI: https://doi.org/10.1111/j.1432-1033.1991.tb16050.x
  • Primary Citation Related Structures: 
    2TGF, 3TGF

  • PubMed Abstract: 

    The solution structure of transforming growth factor alpha has been determined by a combination of high-resolution 1H-nuclear magnetic resonance and distance geometry and restrained molecular dynamics. The 382 restraints derived from the NMR experiments were used to calculate many distance geometry structures, which were then refined by restrained molecular mechanics. Five of these structures were further refined using a variety of methods. Comparison of independently measured parameters, such as calculated hydrogen bonding patterns and experimental amide exchange rates, have been used to evaluate the accuracy of the structures. Also, possible mechanisms to explain the pH-dependent conformational interconversion observed are suggested. Finally comparisons between this work and others on this topic have been made.


  • Organizational Affiliation
    • Department of Biochemistry, University of Oxford, England.

Macromolecule Content 

  • Total Structure Weight: 5.56 kDa 
  • Atom Count: 387 
  • Modeled Residue Count: 50 
  • Deposited Residue Count: 50 
  • Unique protein chains: 1

Macromolecules

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Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
TRANSFORMING GROWTH FACTOR-ALPHA50Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for P01135 (Homo sapiens)
Explore P01135 
Go to UniProtKB:  P01135
PHAROS:  P01135
GTEx:  ENSG00000163235 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP01135
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Submitted: 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 1993-04-15
    Type: Initial release
  • Version 1.1: 2008-03-25
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2017-11-29
    Changes: Derived calculations, Other
  • Version 1.4: 2024-11-13
    Changes: Data collection, Database references, Structure summary