3T61

Crystal Structure of a gluconokinase from Sinorhizobium meliloti 1021


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.250 
  • R-Value Work: 0.237 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structure of a gluconokinase from Sinorhizobium meliloti 1021

Kumaran, D.Almo, S.C.Swaminathan, S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Gluconokinase
A, B
202Rhizobium meliloti (strain 1021)Mutation(s): 0 
Gene Names: gntK
EC: 2.7.1.12
Find proteins for Q92VK3 (Rhizobium meliloti (strain 1021))
Go to UniProtKB:  Q92VK3
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download SDF File 
Download CCD File 
A, B
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.250 
  • R-Value Work: 0.237 
  • Space Group: P 43
Unit Cell:
Length (Å)Angle (°)
a = 68.202α = 90.00
b = 68.202β = 90.00
c = 118.621γ = 90.00
Software Package:
Software NamePurpose
SHELXEmodel building
CBASSdata collection
SHELXDphasing
HKL-2000data reduction
HKL-2000data scaling
ARP/wARPmodel building
CNSrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2011-08-17
    Type: Initial release
  • Version 1.1: 2012-03-21
    Type: Structure summary