3SQD

Crystal structure of human PTIP BRCT5/6-gamma H2AX complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.153 Å
  • R-Value Free: 0.248 
  • R-Value Work: 0.197 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of human PTIP BRCT5/6-gamma H2AX

Yan, W.Shao, Z.H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PAX-interacting protein 1
A, B
219Homo sapiensMutation(s): 0 
Gene Names: PAXIP1 (PAXIP1L, PTIP)
Find proteins for Q6ZW49 (Homo sapiens)
Go to Gene View: PAXIP1
Go to UniProtKB:  Q6ZW49
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Histone H2A.x
C, D
10Homo sapiensMutation(s): 0 
Gene Names: H2AFX (H2AX)
Find proteins for P16104 (Homo sapiens)
Go to Gene View: H2AFX
Go to UniProtKB:  P16104
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
SEP
Query on SEP
C, D
L-PEPTIDE LINKINGC3 H8 N O6 PSER
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.153 Å
  • R-Value Free: 0.248 
  • R-Value Work: 0.197 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 84.973α = 90.00
b = 101.812β = 90.00
c = 61.815γ = 90.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
PHASERphasing
MAR345dtbdata collection
DENZOdata reduction
SCALEPACKdata scaling
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2011-07-05 
  • Released Date: 2011-11-09 
  • Deposition Author(s): Yan, W., Shao, Z.H.

Revision History 

  • Version 1.0: 2011-11-09
    Type: Initial release
  • Version 1.1: 2017-11-08
    Type: Advisory, Refinement description