3SO5

Crystal structure of an Immunoglobulin I-set domain of Lrig3 protein (Lrig3) from MUS MUSCULUS at 1.70 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.206 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of an Immunoglobulin I-set domain of Lrig3 protein (Lrig3) from MUS MUSCULUS at 1.70 A resolution

Joint Center for Structural Genomics (JCSG)Partnership for Stem Cell Biology (STEMCELL)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Leucine-rich repeats and immunoglobulin-like domains protein 3
A, B
112Mus musculusMutation(s): 0 
Gene Names: Lrig3 (Kiaa3016)
Find proteins for Q6P1C6 (Mus musculus)
Go to UniProtKB:  Q6P1C6
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A, B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
CL
Query on CL

Download SDF File 
Download CCD File 
A, B
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Modified Residues  3 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
MLY
Query on MLY
A, B
L-PEPTIDE LINKINGC8 H18 N2 O2LYS
DMG
Query on DMG
A, B
NON-POLYMERC4 H9 N O2

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Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 63.634α = 90.00
b = 63.634β = 90.00
c = 113.405γ = 90.00
Software Package:
Software NamePurpose
SHARPphasing
SCALAdata scaling
PDB_EXTRACTdata extraction
SHELXphasing
MOSFLMdata reduction
BUSTER-TNTrefinement
SHELXDphasing
BUSTERrefinement
MolProbitymodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-07-27
    Type: Initial release
  • Version 1.1: 2015-10-21
    Type: Structure summary
  • Version 1.2: 2017-11-08
    Type: Refinement description