3SCS

Crystal Structure of Rice BGlu1 E386S Mutant Complexed with alpha-Glucosyl Fluoride


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.205 
  • R-Value Work: 0.174 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structural investigation of the basis for cellooligosaccharide synthesis by rice BGlu1 glycosynthases

Pengthaisong, S.Withers, S.G.Kuaprasert, B.Ketudat Cairns, J.R.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Beta-glucosidase 7
A, B
481Oryza sativa subsp. japonicaMutation(s): 1 
Gene Names: BGLU7 (BGLU1)
EC: 3.2.1.21
Find proteins for Q75I93 (Oryza sativa subsp. japonica)
Go to UniProtKB:  Q75I93
Small Molecules
Ligands 5 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
SO4
Query on SO4

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Download CCD File 
A, B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
GLF
Query on GLF

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Download CCD File 
A, B
1-FLUORO-ALPHA-1-DEOXY-D-GLUCOSE
C6 H11 F O5
ATMYEINZLWEOQU-DVKNGEFBSA-N
 Ligand Interaction
GOL
Query on GOL

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Download CCD File 
A, B
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
MES
Query on MES

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Download CCD File 
A, B
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
C6 H13 N O4 S
SXGZJKUKBWWHRA-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.205 
  • R-Value Work: 0.174 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 80.128α = 90.00
b = 100.860β = 90.00
c = 127.004γ = 90.00
Software Package:
Software NamePurpose
REFMACphasing
HKL-2000data collection
HKL-2000data reduction
HKL-2000data scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2012-06-13
    Type: Initial release