3SB1

Hydrogenase expression protein HupH from Thiobacillus denitrificans ATCC 25259


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.67 Å
  • R-Value Free: 0.199 
  • R-Value Work: 0.167 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Hydrogenase expression protein HupH from Thiobacillus denitrificans ATCC 25259

Filippova, E.V.Minasov, G.Shuvalova, L.Kiryukhina, O.Ruan, J.Leo, R.D.Joachimiak, A.Anderson, W.F.Midwest Center for Structural Genomics (MCSG)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
hydrogenase expression protein
A, B
160Thiobacillus denitrificans (strain ATCC 25259)Mutation(s): 0 
Find proteins for Q3SJ38 (Thiobacillus denitrificans (strain ATCC 25259))
Go to UniProtKB:  Q3SJ38
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
PGE
Query on PGE

Download SDF File 
Download CCD File 
A
TRIETHYLENE GLYCOL
C6 H14 O4
ZIBGPFATKBEMQZ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 83.306α = 90.00
b = 39.291β = 104.74
c = 65.192γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
HKL-3000phasing
HKL-3000data reduction
Blu-Icedata collection
HKL-3000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-07-06
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-11-08
    Type: Refinement description