3SA2

Bacuills anthracis Dihydrofolate Reductase bound propargyl-linked TMP analog, UCP1014


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.257 
  • R-Value Work: 0.234 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

SAR studies of heterocyclic propargyl-linked TMP analogs to Bacillus dihydrofolate reductase

Anderson, A.C.Beierlein, J.M.Viswanathan, K.Wright, D.L.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Dihydrofolate reductase
A, B
165Bacillus anthracisMutation(s): 1 
Gene Names: dfrA
EC: 1.5.1.3
Find proteins for Q81R22 (Bacillus anthracis)
Go to UniProtKB:  Q81R22
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAP
Query on NAP

Download SDF File 
Download CCD File 
A, B
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
C21 H28 N7 O17 P3
XJLXINKUBYWONI-NNYOXOHSSA-N
 Ligand Interaction
7DR
Query on 7DR

Download SDF File 
Download CCD File 
A, B
6-ethyl-5-[3-(5-methoxybiphenyl-3-yl)prop-1-yn-1-yl]pyrimidine-2,4-diamine
C22 H22 N4 O
QKLZHVMWTSBUFL-UHFFFAOYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
7DRKi: 330 nM (99) BINDINGDB
7DRIC50: 973 nM (99) BINDINGDB
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.257 
  • R-Value Work: 0.234 
  • Space Group: P 42
Unit Cell:
Length (Å)Angle (°)
a = 78.265α = 90.00
b = 78.265β = 90.00
c = 66.997γ = 90.00
Software Package:
Software NamePurpose
SCALEPACKdata scaling
d*TREKdata reduction
PDB_EXTRACTdata extraction
d*TREKdata scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2012-06-13
    Type: Initial release