3S92

Crystal Structure of the second bromodomain of human BRD3 in complex with the inhibitor JQ1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.36 Å
  • R-Value Free: 0.186 
  • R-Value Work: 0.131 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structure of the second bromodomain of human BRD3 in complex with the inhibitor JQ1

Filippakopoulos, P.Picaud, S.Qi, J.Keates, T.Felletar, I.Fedorov, O.Muniz, J.von Delft, F.Arrowsmith, C.H.Edwards, A.M.Weigelt, J.Bountra, C.Bradner, J.E.Knapp, S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Bromodomain-containing protein 3
A
113Homo sapiensMutation(s): 0 
Gene Names: BRD3 (KIAA0043, RING3L)
Find proteins for Q15059 (Homo sapiens)
Go to Gene View: BRD3
Go to UniProtKB:  Q15059
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
JQ1
Query on JQ1

Download SDF File 
Download CCD File 
A
(6S)-6-(2-tert-butoxy-2-oxoethyl)-4-(4-chlorophenyl)-2,3,9-trimethyl-6,7-dihydrothieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-10-ium
C23 H26 Cl N4 O2 S
DNVXATUJJDPFDM-KRWDZBQOSA-O
 Ligand Interaction
EDO
Query on EDO

Download SDF File 
Download CCD File 
A
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.36 Å
  • R-Value Free: 0.186 
  • R-Value Work: 0.131 
  • Space Group: P 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 33.360α = 90.00
b = 38.020β = 90.00
c = 85.790γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
DNAdata collection
REFMACrefinement
PDB_EXTRACTdata extraction
MOSFLMdata reduction
SCALAdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2011-06-29
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance