3RCO

Crystal structure of a conserved motif in human TDRD7


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.80 Å
  • R-Value Free: 0.230 
  • R-Value Work: 0.174 
  • R-Value Observed: 0.178 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Crystal structure of a conserved motif in human TDRD7

Xu, C.Dong, A.Walker, J.R.Lam, R.Guo, Y.Bian, C.Li, Y.Bountra, C.Weigelt, J.Arrowsmith, C.H.Edwards, A.M.Min, J.Structural Genomics Consortium (SGC)

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Tudor domain-containing protein 7
A, B
89Homo sapiensMutation(s): 0 
Gene Names: TDRD7PCTAIRE2BP
UniProt & NIH Common Fund Data Resources
Find proteins for Q8NHU6 (Homo sapiens)
Explore Q8NHU6 
Go to UniProtKB:  Q8NHU6
PHAROS:  Q8NHU6
GTEx:  ENSG00000196116 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8NHU6
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download Ideal Coordinates CCD File 
C [auth A]
D [auth A]
E [auth A]
F [auth B]
G [auth B]
C [auth A],
D [auth A],
E [auth A],
F [auth B],
G [auth B],
H [auth B],
I [auth B],
J [auth B],
K [auth B],
L [auth B],
M [auth B]
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.80 Å
  • R-Value Free: 0.230 
  • R-Value Work: 0.174 
  • R-Value Observed: 0.178 
  • Space Group: I 2 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 99.788α = 90
b = 99.788β = 90
c = 99.788γ = 90
Software Package:
Software NamePurpose
SBC-Collectdata collection
SOLVEphasing
REFMACrefinement
Cootmodel building
HKL-3000data reduction
HKL-3000data scaling

Structure Validation

View Full Validation Report



Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2012-04-04
    Type: Initial release
  • Version 1.1: 2024-02-21
    Changes: Data collection, Database references, Derived calculations