3RAJ

Crystal structure of human CD38 in complex with the Fab fragment of antibody HB7


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.044 Å
  • R-Value Free: 0.275 
  • R-Value Work: 0.205 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Engineering a novel cytosolic form of CD38 for cyclic ADP-ribose dependent signaling

Zhang, H.Zhao, Y.J.Hao, Q.Lee, H.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
ADP-ribosyl cyclase 1
A
257Homo sapiensMutation(s): 5 
Gene Names: CD38
EC: 3.2.2.6
Find proteins for P28907 (Homo sapiens)
Go to Gene View: CD38
Go to UniProtKB:  P28907
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
heavy chain of the Fab fragment of antibody HB7
H
220N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
light chain of the Fab fragment of antibody HB7
L
211N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.044 Å
  • R-Value Free: 0.275 
  • R-Value Work: 0.205 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 59.664α = 90.00
b = 271.521β = 90.00
c = 136.661γ = 90.00
Software Package:
Software NamePurpose
SCALEPACKdata scaling
PHASERphasing
DENZOdata reduction
PDB_EXTRACTdata extraction
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-04-27
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-11-08
    Type: Refinement description