3R8X

Crystal Structure of Methionyl-tRNA Formyltransferase from Yersinia pestis complexed with L-methionine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.256 Å
  • R-Value Free: 0.231 
  • R-Value Work: 0.177 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structure of Methionyl-tRNA Formyltransferase from Yersinia pestis complexed with L-methionine

Maltseva, N.Kim, Y.Hasseman, J.Anderson, W.F.Joachimiak, A.Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Methionyl-tRNA formyltransferase
A
318Yersinia pestisGene Names: fmt
EC: 2.1.2.9
Find proteins for Q8ZJ80 (Yersinia pestis)
Go to UniProtKB:  Q8ZJ80
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MOE
Query on MOE

Download SDF File 
Download CCD File 
A
METHOXY-ETHOXYL
C3 H7 O2
ASQUQUOEFDHYGP-UHFFFAOYSA-N
 Ligand Interaction
GOL
Query on GOL

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Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
MET
Query on MET

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Download CCD File 
A
METHIONINE
C5 H11 N O2 S
FFEARJCKVFRZRR-BYPYZUCNSA-N
 Ligand Interaction
TRS
Query on TRS

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Download CCD File 
A
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER
C4 H12 N O3
LENZDBCJOHFCAS-UHFFFAOYSA-O
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 62.750α = 90.00
b = 62.750β = 90.00
c = 172.644γ = 90.00
Software Package:
Software NamePurpose
HKL-3000phasing
SBC-Collectdata collection
MOLREPphasing
HKL-3000data reduction
PHENIXrefinement
HKL-3000data collection
HKL-3000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-04-13
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance