3R3R

Structure of the YrdA ferripyochelin binding protein from Salmonella enterica


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.20 Å
  • R-Value Free: 0.160 
  • R-Value Work: 0.138 
  • R-Value Observed: 0.139 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structure of the YrdA ferripyochelin binding protein from Salmonella enterica

Anderson, S.M.Wawrzak, Z.Onopriyenko, O.Peterson, S.N.Anderson, W.F.Savchenko, A.Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
ferripyochelin binding proteinA187Salmonella enterica subsp. enterica serovar TyphimuriumMutation(s): 0 
Gene Names: yrdASTM3399
Find proteins for Q8ZLN3 (Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720))
Explore Q8ZLN3 
Go to UniProtKB:  Q8ZLN3
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.20 Å
  • R-Value Free: 0.160 
  • R-Value Work: 0.138 
  • R-Value Observed: 0.139 
  • Space Group: H 3
  • Diffraction Data DOI: 10.18430/M33R3R Protein Diffraction
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 99.43α = 90
b = 99.43β = 90
c = 46.66γ = 120
Software Package:
Software NamePurpose
PHENIXrefinement
PDB_EXTRACTdata extraction
BLU-MAXdata collection
HKL-2000data reduction
HKL-2000data scaling
SHELXSphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-03-30
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance