3QZ6

The crystal structure of HpcH/HpaI aldolase from Desulfitobacterium hafniense DCB-2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.999 Å
  • R-Value Free: 0.172 
  • R-Value Work: 0.152 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

The crystal structure of HpcH/HpaI aldolase from Desulfitobacterium hafniense DCB-2

Tan, K.Chhor, G.Clancy, S.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
HpcH/HpaI aldolase
A
261Desulfitobacterium hafniense (strain DCB-2 / DSM 10664)Mutation(s): 0 
Find proteins for B8FRX2 (Desulfitobacterium hafniense (strain DCB-2 / DSM 10664))
Go to UniProtKB:  B8FRX2
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.999 Å
  • R-Value Free: 0.172 
  • R-Value Work: 0.152 
  • Space Group: H 3 2
Unit Cell:
Length (Å)Angle (°)
a = 131.531α = 90.00
b = 131.531β = 90.00
c = 176.356γ = 120.00
Software Package:
Software NamePurpose
SBC-Collectdata collection
ARPmodel building
HKL-3000phasing
PHENIXrefinement
HKL-3000data scaling
MLPHAREphasing
HKL-3000data reduction
SHELXDphasing
DMmodel building
DMphasing
WARPmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-03-16
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance