3QVO

Structure of a Rossmann-fold NAD(P)-binding family protein from Shigella flexneri.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.215 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structure of a Rossmann-fold NAD(P)-binding family protein from Shigella flexneri.

Cuff, M.E.Xu, X.Cui, H.Edwards, A.Savchenko, A.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
NmrA family protein
A
236N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MNB
Query on MNB

Download SDF File 
Download CCD File 
A
5-MERCAPTO-2-NITRO-BENZOIC ACID
C7 H5 N O4 S
GANZODCWZFAEGN-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.215 
  • Space Group: P 41 2 2
Unit Cell:
Length (Å)Angle (°)
a = 73.524α = 90.00
b = 73.524β = 90.00
c = 130.246γ = 90.00
Software Package:
Software NamePurpose
DMphasing
SOLVEphasing
HKL-3000data scaling
PDB_EXTRACTdata extraction
Omodel building
HKL-3000phasing
RESOLVEphasing
Cootmodel building
SHELXEmodel building
SCALEPACKdata scaling
SHELXDphasing
CCP4phasing
SBC-Collectdata collection
ARP/wARPmodel building
HKL-3000data reduction
MLPHAREphasing
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-06-01
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2018-10-03
    Type: Data collection