3QIK

Crystal structure of the first PDZ domain of PREX1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.285 Å
  • R-Value Free: 0.269 
  • R-Value Work: 0.242 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of the first PDZ domain of PREX1

Shen, L.Tong, Y.Tempel, W.Li, Y.Arrowsmith, C.H.Edwards, A.M.Bountra, C.Weigelt, J.Park, H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein
A
101Homo sapiensMutation(s): 0 
Gene Names: PREX1 (KIAA1415)
Find proteins for Q8TCU6 (Homo sapiens)
Go to Gene View: PREX1
Go to UniProtKB:  Q8TCU6
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
UNX
Query on UNX

Download SDF File 
Download CCD File 
A
UNKNOWN ATOM OR ION
X
*
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.285 Å
  • R-Value Free: 0.269 
  • R-Value Work: 0.242 
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 78.135α = 90.00
b = 78.135β = 90.00
c = 54.691γ = 120.00
Software Package:
Software NamePurpose
REFMACrefinement
HKL-2000data scaling
StructureStudiodata collection
HKL-2000data reduction
DENZOdata reduction
SHELXphasing
RESOLVEphasing
PDB_EXTRACTdata extraction
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-02-16
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-11-08
    Type: Refinement description