3Q1D

The B-box domain of Trim54


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.182 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Tripartite motif-containing protein 54
A
47Homo sapiensMutation(s): 0 
Gene Names: TRIM54 (MURF, MURF3, RNF30)
Find proteins for Q9BYV2 (Homo sapiens)
Go to Gene View: TRIM54
Go to UniProtKB:  Q9BYV2
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.182 
  • Space Group: P 62 2 2
Unit Cell:
Length (Å)Angle (°)
a = 47.276α = 90.00
b = 47.276β = 90.00
c = 87.047γ = 120.00
Software Package:
Software NamePurpose
HKL-3000data scaling
HKL-3000data collection
REFMACrefinement
PHASERphasing
HKL-3000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-01-26
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance