3PUU

Crystal Structure of Glu121Gln mutant of E. coli Aminopeptidase N


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.187 
  • R-Value Work: 0.152 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Discovery of alpha, beta- and alpha, gamma-Diamino Acid Scaffolds for the Inhibition of M1 Family Aminopeptidases

Gumpena, R.Kishor, C.Ganji, R.J.Addlagatta, A.

(2011) Chemmedchem 6: 1971-1976


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Aminopeptidase N
A
891Escherichia coli (strain K12)Mutation(s): 1 
Gene Names: pepN
EC: 3.4.11.2
Find proteins for P04825 (Escherichia coli (strain K12))
Go to UniProtKB:  P04825
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
SO4
Query on SO4

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Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
GOL
Query on GOL

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Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.187 
  • R-Value Work: 0.152 
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 120.764α = 90.00
b = 120.764β = 90.00
c = 170.844γ = 120.00
Software Package:
Software NamePurpose
ADSCdata collection
HKL-2000data reduction
REFMACphasing
REFMACrefinement
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2010-12-06 
  • Released Date: 2011-11-16 
  • Deposition Author(s): Addlagatta, A.

Revision History 

  • Version 1.0: 2011-11-16
    Type: Initial release