3PUK

Re-refinement of the crystal structure of Munc18-3 and Syntaxin4 N-peptide complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.054 Å
  • R-Value Free: 0.279 
  • R-Value Work: 0.239 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Possible roles for Munc18-1 domain 3a and Syntaxin1 N-peptide and C-terminal anchor in SNARE complex formation

Hu, S.-H.Christie, M.P.Saez, N.J.Latham, C.F.Jarrott, R.Lua, L.H.L.Collins, B.M.Martin, J.L.

(2011) Proc.Natl.Acad.Sci.USA 108: 1040-1045

  • DOI: 10.1073/pnas.0914906108
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • Munc18-1 and Syntaxin1 are essential proteins for SNARE-mediated neurotransmission. Munc18-1 participates in synaptic vesicle fusion via dual roles: as a docking/chaperone protein by binding closed Syntaxin1, and as a fusion protein that binds SNARE ...

    Munc18-1 and Syntaxin1 are essential proteins for SNARE-mediated neurotransmission. Munc18-1 participates in synaptic vesicle fusion via dual roles: as a docking/chaperone protein by binding closed Syntaxin1, and as a fusion protein that binds SNARE complexes in a Syntaxin1 N-peptide dependent manner. The two roles are associated with a closed-open Syntaxin1 conformational transition. Here, we show that Syntaxin N-peptide binding to Munc18-1 is not highly selective, suggesting that other parts of the SNARE complex are involved in binding to Munc18-1. We also find that Syntaxin1, with an N peptide and a physically anchored C terminus, binds to Munc18-1 and that this complex can participate in SNARE complex formation. We report a Munc18-1-N-peptide crystal structure that, together with other data, reveals how Munc18-1 might transit from a conformation that binds closed Syntaxin1 to one that may be compatible with binding open Syntaxin1 and SNARE complexes. Our results suggest the possibility that structural transitions occur in both Munc18-1 and Syntaxin1 during their binary interaction. We hypothesize that Munc18-1 domain 3a undergoes a conformational change that may allow coiled-coil interactions with SNARE complexes.


    Related Citations: 
    • Structure of the Munc18c/Syntaxin4 N-peptide complex defines universal features of the N-peptide binding mode of Sec1/Munc18 proteins
      Hu, S.H.,Latham, C.F.,Gee, C.L.,James, D.E.,Martin, J.L.
      (2007) Proc.Natl.Acad.Sci.USA 104: 8773


    Organizational Affiliation

    Institute for Molecular Bioscience, Division of Chemistry and Structural Biology, The University of Queensland, Brisbane, Queensland 4072, Australia.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Syntaxin-binding protein 3
A, B
592Mus musculusMutation(s): 0 
Gene Names: Stxbp3 (Stxbp3a, Unc18c)
Find proteins for Q60770 (Mus musculus)
Go to UniProtKB:  Q60770
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Syntaxin-4 N-terminal peptide
C, D
10Mus musculusMutation(s): 0 
Gene Names: Stx4 (Stx4a)
Find proteins for P70452 (Mus musculus)
Go to UniProtKB:  P70452
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.054 Å
  • R-Value Free: 0.279 
  • R-Value Work: 0.239 
  • Space Group: P 21 3
Unit Cell:
Length (Å)Angle (°)
a = 170.400α = 90.00
b = 170.400β = 90.00
c = 170.400γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data scaling
PHASERphasing
PHENIXrefinement
DENZOdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-01-19
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2014-02-12
    Type: Database references