3PLT

Crystal structure of Lsp1 from Saccharomyces cerevisiae


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.296 
  • R-Value Work: 0.236 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Eisosome-driven plasma membrane organization is mediated by BAR domains.

Ziolkowska, N.E.Karotki, L.Rehman, M.Huiskonen, J.T.Walther, T.C.

(2011) Nat.Struct.Mol.Biol. 18: 854-856

  • DOI: 10.1038/nsmb.2080

  • PubMed Abstract: 
  • Plasma membranes are organized into domains of different protein and lipid composition. Eisosomes are key complexes for yeast plasma membrane organization, containing primarily Pil1 and Lsp1. Here we show that both proteins consist mostly of a banana ...

    Plasma membranes are organized into domains of different protein and lipid composition. Eisosomes are key complexes for yeast plasma membrane organization, containing primarily Pil1 and Lsp1. Here we show that both proteins consist mostly of a banana-shaped BAR domain common to membrane sculpting proteins, most similar to the ones of amphiphysin, arfaptin 2 and endophilin 2. Our data reveal a previously unrecognized family of BAR-domain proteins involved in plasma membrane organization.


    Organizational Affiliation

    Max Planck Institute of Biochemistry, Organelle Architecture and Dynamics, Martinsried, Germany.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Sphingolipid long chain base-responsive protein LSP1
A, B, C
234Saccharomyces cerevisiae (strain ATCC 204508 / S288c)Mutation(s): 0 
Gene Names: LSP1
Find proteins for Q12230 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Go to Gene View: LSP1
Go to UniProtKB:  Q12230
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.296 
  • R-Value Work: 0.236 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 273.160α = 90.00
b = 38.753β = 99.35
c = 75.509γ = 90.00
Software Package:
Software NamePurpose
HKL-3000phasing
REFMACrefinement
HKL-2000data reduction
HKL-3000data scaling
MOLREPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-06-22
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2011-07-20
    Type: Database references