Macromolecule Content

Total Structure Weight: 24.43 kDa
Atom Count: 2042
Modelled Residue Count: 188
Deposited Residue Count: 214
Unique protein chains: 1

3PD7

Crystal Structure of the Sixth BRCT Domain of Human TopBP1

DOI: 10.2210/pdb3PD7/pdb
Entry: 3PD7 supersedes: 3L3E

Classification: CELL CYCLE
Organism(s): Homo sapiens
Expression System: Escherichia coli BL21(DE3)
Mutation(s): Yes

Deposited: 2010-10-22 Released: 2010-12-08
Deposition Author(s): Lee, J., Xu, C., Cui, G., Thompson, J.R., Mer, G.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.26 Å
R-Value Free: 0.144
R-Value Work: 0.114
R-Value Observed: 0.114

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Crystal Structure of the Sixth BRCT Domain of Human TopBP1

Lee, J., Xu, C., Cui, G., Thompson, J.R., Mer, G.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA topoisomerase 2-binding protein 1	A, B	107	Homo sapiens	Mutation(s): 1 Gene Names: TOPBP1, KIAA0259
UniProt & NIH Common Fund Data Resources
Find proteins for Q92547 (Homo sapiens) Explore Q92547 Go to UniProtKB: Q92547
PHAROS: Q92547 GTEx: ENSG00000163781
Protein Feature View Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.26 Å
R-Value Free: 0.144
R-Value Work: 0.114
R-Value Observed: 0.114
Space Group: P 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 32.877	α = 90
b = 37.911	β = 89.99
c = 79.43	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data collection
PHASER	phasing
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2010-10-22
Released Date: 2010-12-08

Deposition Author(s):

This entry supersedes: 3L3E

Revision History (Full details and data files)

Version 1.0: 2010-12-08
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2011-11-16
Changes: Atomic model

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.